Multiple-platform Microarray Element Search
The Rice Multiple-platform Microarray Element Search page is a tool that allows users the ability to search across five different rice microarray platforms (Affymetrix, Agilent, BGI/Yale, NSF 20K, NSF 45K) to determine which probes from each platform map to a common gene target.
To use this search, submit a file containing a list of identifiers of interest using the file browser menu (max 100 identifiers, one per line). Or, paste directly into the search box a list of indentifiers. Select the output type that is desired (html or tab-delimited plain text) and click 'Submit'.
Example identifiers include:
- LOC_Os01g01030.1 (MSU/TIGR Rice Genome Annotation cDNA)
- Os01g0100500 (RAP2 Rice Genome Annotation cDNA)
- AB007193 (Rice KOME full-length cDNA)
- Os.1000.1.S1_at (Affymetrix Probe Set ID)
- A_71_P100001 (Agilent 22K ID)
- Os000001_01 (BGI/Yale ID)
- TR001003 (NSF Rice Oligonucleotide Microarray 20K ID)
- TR030008 (NSF Rice Oligonucleotide Microarray 45K ID)
probe_matrix.zip Rice Multiple-platform Table (zip, 1,753K)
Last modified: Thursday, 12-Nov-2009 17:22:54 Pacific Standard Time
| Available Data: |
| Platforms: 5 |
| Experiments: 59 |
| Hybridations: 1064 |
