Rice Affymetrix Metaprofiles
We reclassified all the Affymetrix samples (1,155 hybridations) into anatomies and developmental stages, and the information for number of Affymetrix samples assigned for each metaprofile is provided in the following tables.
Anatomy
| Metaprofile | Number of Samples |
| Whole_plant | 6 |
| Callus | 41 |
| Suspension_cell | 1 |
| Dry_seed | 3 |
| Germinating_seed | 16 |
| Plumule | 8 |
| Radicle | 8 |
| Coleoptile | 4 |
| Seedling | 166 |
| Shoot | 164 |
| Leaf | 242 |
| Stem | 8 |
| Whole_internode | 3 |
| Internode_pith_parenchyma | 6 |
| Root | 130 |
| Root_tip | 12 |
| SAM | 27 |
| Flag_leaf | 20 |
| Spikelet | 4 |
| Palea_lemma | 4 |
| Stigma | 8 |
| Ovary | 9 |
| Developing_anther | 86 |
| Mature_anther | 37 |
| Embryosac | 27 |
| Embryo | 3 |
| Endosperm | 15 |
Developmental Stage
| Metaprofile | Number of Samples |
| Callus_suspension_cell | 42 |
| Pregermination | 3 |
| Germinating_seedling | 68 |
| 1st_leaf | 53 |
| 2nd_leaf | 244 |
| 3rd_leaf | 123 |
| Tiller_initiation | 57 |
| Tillering_stage | 27 |
| P1 | 33 |
| P2 | 21 |
| P3 | 19 |
| P4 | 13 |
| P5 | 7 |
| P6 | 3 |
| S1 | 3 |
| S2 | 3 |
| S3 | 10 |
| S4 | 3 |
| S5 | 3 |
Last modified: Friday, 04-May-2012 05:57:51 Pacific Daylight Time
| Available Data: |
| Platforms: 6 |
| Experiments: 105 |
| Hybridations: 1,867 |
Last Update: Apr. 2012